Sorry you aren't getting this to work yet! This is not a beginners project. It is an intermediate kit. Please read through some tutorials on using the command line instead of your IDEs. Something is screwing up the runs.
Your errors show you are running python3 which will not work:
"File "/usr/lib/python3/dist-packages/pkg_resources/__init__.py", line 2433, in require" for example.
From the command line type:
cd cd /home/pi/Thunder_IOT/SDL_Pi_ThunderBoard_IOT-master